Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | APR48_36080 | Not Available | Negative | 7728530 - 7729042 | 19346.4 |
| tripartite tricarboxylate transporter tcta | APR48_36085 | Not Available | Negative | 7729213 - 7730733 | 52829.1 |
| tripartite tricarboxylate transporter tctb | APR48_36090 | Not Available | Negative | 7730823 - 7731374 | 18907.1 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_36095 | Not Available | Negative | 7731469 - 7732428 | 32935.8 |
| two-component system response regulator | APR48_36100 | Not Available | Positive | 7732627 - 7733307 | 24947.5 |
| histidine kinase | APR48_36105 | Not Available | Positive | 7733304 - 7734725 | 51990.0 |
| rna-binding protein | APR48_36110 | Not Available | Positive | 7734729 - 7735157 | 15981.0 |
| polyphosphate kinase | APR48_36115 | Not Available | Positive | 7735220 - 7736026 | 30733.9 |
| hypothetical protein | APR48_36120 | Not Available | Positive | 7736178 - 7736372 | 7199.85 |
| hypothetical protein | APR48_36125 | Not Available | Negative | 7736436 - 7737104 | 23978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
