Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | APR48_36025 | Not Available | Positive | 7717100 - 7717804 | 25574.1 |
| laci family transcriptional regulator | APR48_36030 | Not Available | Negative | 7717820 - 7718785 | 34091.2 |
| peroxiredoxin | APR48_36035 | Not Available | Negative | 7718833 - 7719273 | 15294.1 |
| long-chain fatty acid--coa ligase | APR48_36040 | Not Available | Positive | 7719567 - 7721258 | 62038.6 |
| nuclease | APR48_36045 | Not Available | Positive | 7721396 - 7721923 | 19433.8 |
| tat pathway signal protein | APR48_36050 | Not Available | Positive | 7722022 - 7723944 | 68790.8 |
| hypothetical protein | APR48_36055 | Not Available | Negative | 7723975 - 7724226 | 9383.88 |
| pyridine nucleotide-disulfide oxidoreductase | APR48_36060 | Not Available | Negative | 7724252 - 7725598 | 47463.9 |
| sulfatase maturase | APR48_36065 | Not Available | Positive | 7725772 - 7727025 | 45927.1 |
| dimethylhistidine n-methyltransferase | APR48_36070 | Not Available | Positive | 7727028 - 7728068 | 37420.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
