Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_35975 | Not Available | Positive | 7708927 - 7709718 | 28688.4 |
| coa-transferase | APR48_35980 | Not Available | Positive | 7709733 - 7710956 | 43295.8 |
| gcn5 family acetyltransferase | APR48_35985 | Not Available | Negative | 7710960 - 7711445 | 18002.6 |
| amino acid abc transporter atp-binding protein | APR48_35990 | Not Available | Negative | 7711484 - 7712266 | 28299.8 |
| amino acid abc transporter permease | APR48_35995 | Not Available | Negative | 7712250 - 7712903 | 23416.3 |
| polar amino acid abc transporter permease | APR48_36000 | Not Available | Negative | 7712911 - 7713573 | 23925.9 |
| amino acid abc transporter substrate-binding protein | APR48_36005 | Not Available | Negative | 7713589 - 7714389 | 28109.1 |
| gntr family transcriptional regulator | APR48_36010 | Not Available | Negative | 7714386 - 7715162 | 27714.3 |
| hypothetical protein | APR48_36015 | Not Available | Negative | 7715254 - 7716303 | 38603.7 |
| ester cyclase | APR48_36020 | Not Available | Negative | 7716473 - 7716973 | 18812.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
