Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | APR48_35875 | Not Available | Positive | 7693474 - 7694094 | 22748.4 |
| dehydratase | APR48_35880 | Not Available | Positive | 7694180 - 7694650 | 17492.2 |
| hypothetical protein | APR48_35885 | Not Available | Negative | 7694672 - 7694965 | 10083.1 |
| rrna methylase | APR48_35890 | Not Available | Negative | 7695097 - 7695558 | 17339.8 |
| phosphoribosyltransferase | APR48_35895 | Not Available | Negative | 7695579 - 7696295 | 25542.2 |
| biotin synthase | APR48_35900 | Not Available | Positive | 7696319 - 7697236 | 34229.1 |
| hypothetical protein | APR48_35905 | Not Available | Positive | 7697415 - 7697891 | 17632.5 |
| cytochrome c oxidase subunit ii | APR48_35910 | Not Available | Positive | 7697951 - 7699123 | 42573.6 |
| cytochrome oxidase subunit i | APR48_35915 | Not Available | Positive | 7699186 - 7700823 | 60754.2 |
| cytochrome c oxidase assembly protein | APR48_35920 | Not Available | Positive | 7701021 - 7701647 | 22861.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
