Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | APR48_04490 | Not Available | Positive | 973630 - 974157 | 20529.3 |
| Hypothetical protein | APR48_04495 | Not Available | Positive | 974154 - 974570 | 15426.5 |
| Hypothetical protein | APR48_04500 | Not Available | Positive | 974570 - 974884 | 11625.2 |
| hypothetical protein | APR48_04505 | Not Available | Positive | 974881 - 975327 | 17043.4 |
| hypothetical protein | APR48_04510 | Not Available | Negative | 975330 - 975572 | 9098.64 |
| hypothetical protein | APR48_04515 | Not Available | Positive | 975584 - 975844 | 9374.09 |
| Attr | Not Available | Not Available | Positive | 975656 - 975669 | Not Available |
| Putative integrase | APR48_04520 | Not Available | Positive | 975841 - 976869 | 39039.1 |
| Attl | Not Available | Not Available | Positive | 2992683 - 2992695 | Not Available |
| Integrase | APR48_14130 | Not Available | Negative | 2996703 - 2998622 | 70662.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
