Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase | APR48_35720 | Not Available | Positive | 7661804 - 7662229 | 15615.8 |
| mfs transporter | APR48_35725 | Not Available | Positive | 7662256 - 7663455 | 42095.3 |
| 3-oxoadipate enol-lactonase | APR48_35730 | Not Available | Positive | 7663452 - 7664216 | 27207.5 |
| 4-hydroxyphenylpyruvate dioxygenase | APR48_35735 | Not Available | Positive | 7664408 - 7666285 | 67799.6 |
| disulfide bond formation protein dsba | APR48_35745 | Not Available | Positive | 7667815 - 7668510 | 25233.8 |
| hypothetical protein | APR48_35750 | Not Available | Positive | 7668657 - 7670195 | 56169.9 |
| hypothetical protein | APR48_35755 | Not Available | Positive | 7670221 - 7671432 | 43446.8 |
| hypothetical protein | APR48_35760 | Not Available | Negative | 7671436 - 7672062 | 23302.4 |
| hypothetical protein | APR48_35765 | Not Available | Negative | 7672078 - 7673001 | 32734.3 |
| 2-nitropropane dioxygenase | APR48_35770 | Not Available | Positive | 7673225 - 7674286 | 36242.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
