Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | APR48_35670 | Not Available | Negative | 7646464 - 7647696 | 45046.7 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_35675 | Not Available | Negative | 7647897 - 7649126 | 44680.4 |
| long-chain fatty acid--coa ligase | APR48_35680 | Not Available | Negative | 7649276 - 7650904 | 59803.0 |
| hypothetical protein | APR48_35685 | Not Available | Negative | 7651108 - 7652745 | 57306.7 |
| hypothetical protein | APR48_35690 | Not Available | Positive | 7653246 - 7653731 | 18115.3 |
| hypothetical protein | APR48_35695 | Not Available | Positive | 7654652 - 7656523 | 67050.2 |
| 4-hydroxyphenylpyruvate dioxygenase | APR48_35700 | Not Available | Negative | 7657642 - 7658427 | 28811.8 |
| shikimate dehydrogenase | APR48_35705 | Not Available | Positive | 7658627 - 7659541 | 32273.9 |
| shikimate dehydrogenase | APR48_35710 | Not Available | Positive | 7659568 - 7660401 | 29321.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | APR48_35715 | Not Available | Positive | 7660569 - 7661768 | 42000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
