Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_35565 | Not Available | Negative | 7623299 - 7623559 | 9911.44 |
| hypothetical protein | APR48_35570 | Not Available | Negative | 7623556 - 7624701 | 41748.6 |
| hypothetical protein | APR48_35575 | Not Available | Negative | 7624701 - 7625048 | 11904.3 |
| hypothetical protein | APR48_35580 | Not Available | Negative | 7625045 - 7626211 | 42537.0 |
| hypothetical protein | APR48_35590 | Not Available | Positive | 7627213 - 7629871 | 91083.5 |
| glutathione s-transferase | APR48_35595 | Not Available | Negative | 7629912 - 7630850 | 34309.3 |
| dna alkylation response protein | APR48_35600 | Not Available | Negative | 7630885 - 7632534 | 58856.8 |
| 2-alkenal reductase | APR48_35605 | Not Available | Negative | 7632563 - 7633579 | 35993.6 |
| phenylacetic acid degradation protein | APR48_35610 | Not Available | Negative | 7633673 - 7634107 | 15875.1 |
| gluconate 5-dehydrogenase | APR48_35615 | Not Available | Negative | 7634139 - 7634936 | 28155.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
