Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | APR48_35515 | Not Available | Negative | 7608881 - 7609615 | 25201.3 |
| long-chain fatty acid--coa ligase | APR48_35520 | Not Available | Negative | 7609612 - 7611168 | 56038.4 |
| hypothetical protein | APR48_35525 | Not Available | Negative | 7611173 - 7612150 | 33857.3 |
| oxidoreductase | APR48_35530 | Not Available | Negative | 7612191 - 7613012 | 27836.4 |
| laci family transcriptional regulator | APR48_35535 | Not Available | Positive | 7613082 - 7614110 | 36594.1 |
| ketosteroid isomerase | APR48_35540 | Not Available | Negative | 7614129 - 7614491 | 13436.8 |
| hypothetical protein | APR48_35545 | Not Available | Negative | 7614631 - 7614978 | 13114.5 |
| hypothetical protein | APR48_35550 | Not Available | Negative | 7615049 - 7615810 | 28304.2 |
| alpha-2-macroglobulin | APR48_35555 | Not Available | Negative | 7615915 - 7621935 | 216329.0 |
| acyltransferase | APR48_35560 | Not Available | Positive | 7622120 - 7623262 | 42233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
