Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | APR48_35455 | Not Available | Negative | 7597442 - 7598470 | 37208.9 |
| biopolymer transporter exbd | APR48_35460 | Not Available | Negative | 7598472 - 7598897 | 15131.2 |
| flagellar motor protein mota | APR48_35465 | Not Available | Negative | 7598953 - 7599585 | 22568.8 |
| exodeoxyribonuclease vii | APR48_35470 | Not Available | Positive | 7599899 - 7601203 | 46745.2 |
| lysr family transcriptional regulator | APR48_35485 | Not Available | Negative | 7601743 - 7602660 | 33072.2 |
| hypothetical protein | APR48_35490 | Not Available | Negative | 7602726 - 7603898 | 41052.0 |
| rna polymerase subunit sigma | APR48_35495 | Not Available | Positive | 7604057 - 7604569 | 18971.9 |
| iron dicitrate transport regulator fecr | APR48_35500 | Not Available | Positive | 7604566 - 7605540 | 34941.9 |
| hypothetical protein | APR48_35505 | Not Available | Positive | 7605652 - 7608075 | 87927.5 |
| citrate synthase | APR48_35510 | Not Available | Negative | 7608088 - 7608870 | 27719.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
