Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_35405 | Not Available | Negative | 7584437 - 7584820 | 13713.6 |
| lexa family transcriptional regulator | APR48_35410 | Not Available | Negative | 7584998 - 7585672 | 24466.8 |
| l-asparaginase | APR48_35415 | Not Available | Positive | 7585745 - 7586707 | 32926.3 |
| adenylate kinase | APR48_35420 | Not Available | Negative | 7586781 - 7587437 | 23646.4 |
| type vi secretion system vgr family protein | APR48_35425 | Not Available | Positive | 7587720 - 7590029 | 85187.6 |
| hypothetical protein | APR48_35430 | Not Available | Positive | 7590032 - 7591060 | 37989.6 |
| hypothetical protein | APR48_35435 | Not Available | Positive | 7591065 - 7596182 | 188150.0 |
| hypothetical protein | APR48_35440 | Not Available | Positive | 7596202 - 7596525 | 12080.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | APR48_35445 | Not Available | Negative | 7596515 - 7597282 | 26620.9 |
| tetraacyldisaccharide 4'-kinase | APR48_35450 | Not Available | Negative | 7597279 - 7597461 | 6709.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
