Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | APR48_35355 | Not Available | Positive | 7570819 - 7571943 | 40669.7 |
| hypothetical protein | APR48_35360 | Not Available | Positive | 7571945 - 7572985 | 38473.9 |
| gnat family acetyltransferase | APR48_35365 | Not Available | Positive | 7575723 - 7576205 | 17238.7 |
| acyl-coa dehydrogenase | APR48_35370 | Not Available | Negative | 7576275 - 7577546 | 46328.6 |
| aminoglycoside phosphotransferase | APR48_35375 | Not Available | Negative | 7577719 - 7578807 | 40443.3 |
| crp/fnr family transcriptional regulator | APR48_35380 | Not Available | Negative | 7578809 - 7579528 | 26876.4 |
| enoyl-coa hydratase | APR48_35385 | Not Available | Negative | 7579606 - 7580385 | 27488.7 |
| 3-hydroxyacyl-coa dehydrogenase | APR48_35390 | Not Available | Negative | 7580394 - 7581914 | 54374.4 |
| transporter | APR48_35395 | Not Available | Negative | 7582083 - 7583240 | 39928.8 |
| 3-phosphoglycerate dehydrogenase | APR48_35400 | Not Available | Negative | 7583245 - 7584252 | 36761.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
