Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | APR48_35240 | Not Available | Positive | 7547934 - 7548299 | 13438.2 |
| abc transporter substrate-binding protein | APR48_35245 | Not Available | Positive | 7548357 - 7549322 | 33611.6 |
| atpase p | APR48_35255 | Not Available | Positive | 7550307 - 7551302 | 36393.7 |
| trag family protein | APR48_35260 | Not Available | Positive | 7551268 - 7553205 | 70789.5 |
| hypothetical protein | APR48_35265 | Not Available | Negative | 7553377 - 7553640 | 9505.41 |
| hypothetical protein | APR48_35270 | Not Available | Positive | 7553665 - 7553982 | 11815.2 |
| hypothetical protein | APR48_35280 | Not Available | Positive | 7555023 - 7555253 | 8359.08 |
| amidohydrolase | APR48_35285 | Not Available | Negative | 7555437 - 7556522 | 38739.8 |
| sodium:solute symporter | APR48_35290 | Not Available | Negative | 7556579 - 7558096 | 54520.9 |
| hypothetical protein | APR48_35295 | Not Available | Negative | 7558101 - 7558328 | 8208.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
