Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_35085 | Not Available | Negative | 7520997 - 7521959 | 34054.1 |
| tannase | APR48_35090 | Not Available | Negative | 7522051 - 7523556 | 52438.7 |
| helicase snf2 | APR48_35095 | Not Available | Positive | 7523557 - 7523890 | 10759.3 |
| hypothetical protein | APR48_35100 | Not Available | Negative | 7524045 - 7524428 | 13872.3 |
| arac family transcriptional regulator | APR48_35105 | Not Available | Negative | 7524546 - 7525379 | 29196.0 |
| arac family transcriptional regulator | APR48_35110 | Not Available | Positive | 7525490 - 7526443 | 34732.8 |
| hypothetical protein | APR48_35115 | Not Available | Positive | 7526485 - 7527015 | 18700.3 |
| acp phosphodiesterase | APR48_35120 | Not Available | Negative | 7527012 - 7527644 | 23761.3 |
| chaperone | APR48_35125 | Not Available | Negative | 7527650 - 7527967 | 10895.8 |
| padr family transcriptional regulator | APR48_35130 | Not Available | Positive | 7528070 - 7528465 | 14527.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
