Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine methyltransferase | APR48_35035 | Not Available | Positive | 7511014 - 7511511 | 17668.9 |
| hypothetical protein | APR48_35040 | Not Available | Positive | 7511576 - 7512508 | 32011.0 |
| hypothetical protein | APR48_35045 | Not Available | Negative | 7512516 - 7513178 | 24112.6 |
| cytochrome c | APR48_35050 | Not Available | Positive | 7513369 - 7514118 | 26250.8 |
| alcohol dehydrogenase | APR48_35055 | Not Available | Positive | 7514129 - 7515421 | 45898.4 |
| hypothetical protein | APR48_35060 | Not Available | Positive | 7515685 - 7516515 | 28733.2 |
| amp-dependent acyl-coa synthetase | APR48_35065 | Not Available | Negative | 7516544 - 7518097 | 55836.9 |
| saccharopine dehydrogenase | APR48_35070 | Not Available | Negative | 7518103 - 7519239 | 40686.7 |
| oxidoreductase | APR48_35075 | Not Available | Negative | 7519295 - 7520098 | 26544.3 |
| tetr family transcriptional regulator | APR48_35080 | Not Available | Positive | 7520312 - 7520995 | 25891.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
