Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | APR48_34980 | Not Available | Negative | 7498826 - 7499776 | 33669.7 |
| ligand-gated channel protein | APR48_34985 | Not Available | Negative | 7499838 - 7501937 | 74999.7 |
| hypothetical protein | APR48_34990 | Not Available | Negative | 7502017 - 7502358 | 11737.5 |
| peptide methionine sulfoxide reductase | APR48_34995 | Not Available | Negative | 7502461 - 7503012 | 20304.7 |
| tetr family transcriptional regulator | APR48_35000 | Not Available | Positive | 7503112 - 7503825 | 26620.0 |
| protein-l-isoaspartate o-methyltransferase | APR48_35005 | Not Available | Positive | 7503868 - 7504545 | 24791.0 |
| sulfurtransferase | APR48_35010 | Not Available | Positive | 7504560 - 7504898 | 12168.4 |
| channel protein tolc | APR48_35015 | Not Available | Positive | 7504923 - 7506461 | 53795.8 |
| phosphoglucomutase | APR48_35025 | Not Available | Negative | 7507906 - 7509288 | 48890.4 |
| adenosine deaminase | APR48_35030 | Not Available | Positive | 7509400 - 7511007 | 57276.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
