Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease iii | APR48_34930 | Not Available | Negative | 7488351 - 7489142 | 29341.0 |
| short-chain dehydrogenase | APR48_34935 | Not Available | Negative | 7489210 - 7489926 | 24972.2 |
| gcn5 family acetyltransferase | APR48_34940 | Not Available | Negative | 7489960 - 7490658 | 24852.0 |
| arac family transcriptional regulator | APR48_34945 | Not Available | Positive | 7490733 - 7491695 | 35097.7 |
| hypothetical protein | APR48_34950 | Not Available | Positive | 7492121 - 7494487 | 85053.2 |
| hypothetical protein | APR48_34955 | Not Available | Positive | 7494547 - 7495293 | 27023.9 |
| rna polymerase subunit sigma | APR48_34960 | Not Available | Positive | 7495425 - 7495931 | 18722.7 |
| iron dicitrate transport regulator fecr | APR48_34965 | Not Available | Positive | 7495928 - 7496932 | 36217.1 |
| flagellar motor protein motb | APR48_34970 | Not Available | Negative | 7497206 - 7498293 | 39314.1 |
| hypothetical protein | APR48_34975 | Not Available | Positive | 7498312 - 7498710 | 12531.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
