Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR48_34880 | Not Available | Positive | 7479919 - 7480476 | 21017.0 |
| hypothetical protein | APR48_34885 | Not Available | Positive | 7480487 - 7481968 | 53916.1 |
| hypothetical protein | APR48_34890 | Not Available | Positive | 7482002 - 7482739 | 26733.5 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | APR48_34895 | Not Available | Positive | 7482774 - 7483631 | 30864.8 |
| hypothetical protein | APR48_34900 | Not Available | Positive | 7483650 - 7484621 | 34358.2 |
| nadph-dependent fmn reductase | APR48_34905 | Not Available | Positive | 7484636 - 7485205 | 20435.6 |
| molybdenum cofactor guanylyltransferase | APR48_34910 | Not Available | Positive | 7485227 - 7485826 | 21380.5 |
| gcn5 family acetyltransferase | APR48_34915 | Not Available | Negative | 7485883 - 7486389 | 17870.5 |
| nmra family protein | APR48_34920 | Not Available | Negative | 7486464 - 7487549 | 40669.2 |
| hypothetical protein | APR48_34925 | Not Available | Negative | 7487679 - 7488275 | 21437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
