Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | APR48_34775 | Not Available | Negative | 7456860 - 7457498 | 22646.0 |
| abc transporter substrate-binding protein | APR48_34780 | Not Available | Negative | 7457563 - 7458363 | 28293.2 |
| dimethylmenaquinone methyltransferase | APR48_34785 | Not Available | Negative | 7458420 - 7459106 | 25083.4 |
| gntr family transcriptional regulator | APR48_34790 | Not Available | Positive | 7459203 - 7459928 | 26035.7 |
| short-chain dehydrogenase | APR48_34795 | Not Available | Negative | 7459919 - 7460761 | 29638.5 |
| arac family transcriptional regulator | APR48_34800 | Not Available | Positive | 7460898 - 7461863 | 35606.1 |
| hypothetical protein | APR48_34805 | Not Available | Negative | 7461903 - 7462193 | 9073.24 |
| ribonuclease bn | APR48_34810 | Not Available | Positive | 7462412 - 7463500 | 37657.6 |
| hypothetical protein | APR48_34820 | Not Available | Negative | 7465226 - 7465525 | 9885.59 |
| methionine aminopeptidase | APR48_34825 | Not Available | Negative | 7465651 - 7466442 | 28680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
