Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_34725 | Not Available | Positive | 7443832 - 7446063 | 80461.3 |
| tonb-dependent receptor | APR48_34730 | Not Available | Positive | 7446579 - 7448663 | 76227.9 |
| abc transporter substrate-binding protein | APR48_34735 | Not Available | Positive | 7448693 - 7449577 | 31652.1 |
| abc transporter permease | APR48_34740 | Not Available | Positive | 7449574 - 7450575 | 34138.8 |
| abc transporter atp-binding protein | APR48_34745 | Not Available | Positive | 7450572 - 7451312 | 26525.2 |
| luciferase | APR48_34750 | Not Available | Positive | 7451324 - 7452337 | 37088.7 |
| inositol monophosphatase | APR48_34755 | Not Available | Positive | 7452385 - 7453218 | 29599.1 |
| gamma-glutamyltransferase | APR48_34760 | Not Available | Negative | 7453233 - 7454789 | 55075.1 |
| hypothetical protein | APR48_34765 | Not Available | Positive | 7455031 - 7456005 | 34551.1 |
| ester cyclase | APR48_34770 | Not Available | Positive | 7456062 - 7456448 | 14703.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
