Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_34665 | Not Available | Negative | 7432517 - 7433167 | 23438.4 |
| acyl-coa synthetase | APR48_34670 | Not Available | Negative | 7433124 - 7434161 | 38569.8 |
| coa ligase | APR48_34675 | Not Available | Negative | 7434158 - 7435876 | 60643.3 |
| hypothetical protein | APR48_34680 | Not Available | Negative | 7435923 - 7436573 | 23544.9 |
| acyl carrier protein | APR48_34685 | Not Available | Negative | 7436579 - 7436884 | 10939.8 |
| atp-binding protein | APR48_34690 | Not Available | Positive | 7436987 - 7438501 | 53784.4 |
| crp/fnr family transcriptional regulator | APR48_34695 | Not Available | Positive | 7438521 - 7439228 | 26574.9 |
| hypothetical protein | APR48_34700 | Not Available | Negative | 7439262 - 7441601 | 83035.9 |
| hypothetical protein | APR48_34705 | Not Available | Negative | 7441750 - 7442391 | 22391.4 |
| rna polymerase subunit sigma | APR48_34710 | Not Available | Negative | 7442388 - 7442966 | 21270.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
