Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_34560 | Not Available | Negative | 7409967 - 7410482 | 16450.0 |
| hypothetical protein | APR48_34565 | Not Available | Negative | 7410479 - 7410976 | 18501.5 |
| glycerol acyltransferase | APR48_34570 | Not Available | Negative | 7411164 - 7413104 | 70034.2 |
| hypothetical protein | APR48_34575 | Not Available | Negative | 7413176 - 7414033 | 30057.0 |
| cro/cl family transcriptional regulator | APR48_34580 | Not Available | Positive | 7414191 - 7414925 | 28021.2 |
| orotidine 5'-phosphate decarboxylase | APR48_34585 | Not Available | Negative | 7414942 - 7415766 | 29399.9 |
| uracil-dna glycosylase | APR48_34590 | Not Available | Negative | 7415800 - 7416419 | 21029.4 |
| aromatic ring-opening dioxygenase liga | APR48_34600 | Not Available | Negative | 7416766 - 7418859 | 76216.0 |
| cell division protein ftsz | APR48_34605 | Not Available | Negative | 7418940 - 7420037 | 38925.0 |
| chromosome segregation protein smc | APR48_34610 | Not Available | Negative | 7420051 - 7423566 | 129851.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
