Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | APR48_34510 | Not Available | Positive | 7399291 - 7399920 | 22244.0 |
| atp-dependent dna helicase recg | APR48_34515 | Not Available | Negative | 7399946 - 7402129 | 78838.5 |
| sugar nucleotide epimerase | APR48_34520 | Not Available | Negative | 7402114 - 7403604 | 54208.0 |
| hypothetical protein | APR48_34525 | Not Available | Negative | 7403601 - 7404272 | 25225.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | APR48_34530 | Not Available | Positive | 7404414 - 7405466 | 38558.3 |
| queuine trna-ribosyltransferase | APR48_34535 | Not Available | Positive | 7405472 - 7406644 | 43644.6 |
| 3-oxoacyl-acp reductase | APR48_34540 | Not Available | Positive | 7406704 - 7407480 | 27490.8 |
| hypothetical protein | APR48_34545 | Not Available | Negative | 7407555 - 7407947 | 13327.1 |
| serine endopeptidase | APR48_34550 | Not Available | Negative | 7408047 - 7409138 | 40831.1 |
| hypothetical protein | APR48_34555 | Not Available | Negative | 7409176 - 7409970 | 28814.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
