Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_34405 | Not Available | Positive | 7377348 - 7377800 | 15861.5 |
| hypothetical protein | APR48_34410 | Not Available | Positive | 7377794 - 7378192 | 13665.0 |
| two-component system response regulator | APR48_34415 | Not Available | Positive | 7378231 - 7378926 | 25619.1 |
| histidine kinase | APR48_34420 | Not Available | Positive | 7378923 - 7380329 | 52916.0 |
| nadp-dependent oxidoreductase | APR48_34425 | Not Available | Positive | 7380437 - 7381486 | 37325.4 |
| fimbrial protein | APR48_34430 | Not Available | Positive | 7381686 - 7382225 | 18021.5 |
| molecular chaperone groes | APR48_34435 | Not Available | Positive | 7382424 - 7383194 | 27592.4 |
| usher protein | APR48_34440 | Not Available | Positive | 7383212 - 7385935 | 97425.2 |
| hypothetical protein | APR48_34445 | Not Available | Positive | 7385932 - 7386975 | 36452.4 |
| hypothetical protein | APR48_34450 | Not Available | Negative | 7387020 - 7387376 | 12563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
