Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | APR48_34355 | Not Available | Negative | 7370342 - 7370929 | 21033.1 |
| cytochrome b | APR48_34360 | Not Available | Negative | 7370926 - 7371612 | 24283.9 |
| cytochrome c | APR48_34365 | Not Available | Positive | 7371781 - 7372227 | 15479.6 |
| redoxin | APR48_34370 | Not Available | Negative | 7372304 - 7372801 | 17734.5 |
| hypothetical protein | APR48_34375 | Not Available | Positive | 7372905 - 7373468 | 19362.2 |
| pts fructose transporter subunit iia | APR48_34380 | Not Available | Positive | 7373620 - 7374075 | 16291.9 |
| phosphocarrier protein hpr | APR48_34385 | Not Available | Positive | 7374044 - 7374313 | 9580.72 |
| phosphoenolpyruvate-protein phosphotransferase | APR48_34390 | Not Available | Positive | 7374310 - 7376106 | 65619.3 |
| hypothetical protein | APR48_34395 | Not Available | Positive | 7376232 - 7376600 | 12448.5 |
| hypothetical protein | APR48_34400 | Not Available | Positive | 7376778 - 7377242 | 16815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
