Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | APR48_34305 | Not Available | Positive | 7365350 - 7365970 | 23069.8 |
| 50s ribosomal protein l23 | APR48_34310 | Not Available | Positive | 7365967 - 7366302 | 12096.9 |
| 50s ribosomal protein l2 | APR48_34315 | Not Available | Positive | 7366305 - 7367129 | 30158.5 |
| 30s ribosomal protein s19 | APR48_34320 | Not Available | Positive | 7367140 - 7367418 | 10400.9 |
| 50s ribosomal protein l22 | APR48_34325 | Not Available | Positive | 7367428 - 7367760 | 12072.8 |
| 30s ribosomal protein s3 | APR48_34330 | Not Available | Positive | 7367776 - 7368687 | 33121.8 |
| 50s ribosomal protein l16 | APR48_34335 | Not Available | Positive | 7368755 - 7369171 | 15417.8 |
| 50s ribosomal protein l29 | APR48_34340 | Not Available | Positive | 7369227 - 7369436 | 7678.33 |
| 30s ribosomal protein s17 | APR48_34345 | Not Available | Positive | 7369446 - 7369715 | 10162.5 |
| peroxiredoxin | APR48_34350 | Not Available | Positive | 7369813 - 7370319 | 17617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
