Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | APR48_34155 | Not Available | Negative | 7334641 - 7335186 | 20012.4 |
| threonine--trna ligase | APR48_34160 | Not Available | Negative | 7335360 - 7337267 | 72402.5 |
| isocitrate lyase | APR48_34165 | Not Available | Negative | 7337602 - 7338933 | 48723.3 |
| gamma-glutamyl cyclotransferase | APR48_34170 | Not Available | Negative | 7339197 - 7339607 | 14820.5 |
| hypothetical protein | APR48_34175 | Not Available | Positive | 7339644 - 7340591 | 33446.2 |
| hypothetical protein | APR48_34180 | Not Available | Positive | 7340722 - 7341180 | 15557.5 |
| arac family transcriptional regulator | APR48_34185 | Not Available | Negative | 7341263 - 7342015 | 27122.5 |
| preprotein translocase subunit secd | APR48_34190 | Not Available | Positive | 7342146 - 7342439 | 10354.3 |
| thiamine pyrophosphate-binding protein | APR48_34195 | Not Available | Negative | 7342405 - 7344129 | 61619.5 |
| tetr family transcriptional regulator | APR48_34200 | Not Available | Positive | 7344213 - 7344869 | 25055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
