Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | APR48_34100 | Not Available | Negative | 7326537 - 7327298 | 26641.8 |
| arac family transcriptional regulator | APR48_34105 | Not Available | Positive | 7327362 - 7328294 | 33490.5 |
| Trna-asp | Not Available | Not Available | Positive | 7328619 - 7328695 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 7328765 - 7328840 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 7328896 - 7328971 | Not Available |
| glutamyl-q trna(asp) ligase | APR48_34125 | Not Available | Negative | 7329044 - 7330435 | 51457.4 |
| o-succinylhomoserine sulfhydrylase | APR48_34130 | Not Available | Negative | 7330447 - 7331688 | 43855.6 |
| amidophosphoribosyltransferase | APR48_34135 | Not Available | Negative | 7331709 - 7333208 | 54581.5 |
| colicin v synthesis protein | APR48_34140 | Not Available | Negative | 7333221 - 7333706 | 17042.3 |
| 50s ribosomal protein l35 | APR48_34150 | Not Available | Negative | 7334238 - 7334441 | 7505.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
