Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_34045 | Not Available | Positive | 7300219 - 7300542 | 12217.6 |
| hypothetical protein | APR48_34050 | Not Available | Negative | 7302790 - 7303098 | 11613.5 |
| polyketide synthase | APR48_34060 | Not Available | Negative | 7312524 - 7317086 | 160349.0 |
| non-ribosomal peptide synthetase | APR48_34065 | Not Available | Negative | 7317086 - 7322401 | 191565.0 |
| thioesterase | APR48_34070 | Not Available | Negative | 7322504 - 7323193 | 25620.6 |
| antibiotic synthesis protein mbth | APR48_34075 | Not Available | Negative | 7323253 - 7323507 | 9533.09 |
| iron dicitrate transport regulator fecr | APR48_34080 | Not Available | Negative | 7323684 - 7323938 | 9554.88 |
| rna polymerase subunit sigma-70 | APR48_34085 | Not Available | Negative | 7324056 - 7324580 | 19511.6 |
| plasmid replication/partition related protein | APR48_34090 | Not Available | Positive | 7324975 - 7325814 | 30124.4 |
| twin-arginine translocation pathway signal | APR48_34095 | Not Available | Negative | 7325837 - 7326421 | 19635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
