Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalocrotonate tautomerase | APR48_33895 | Not Available | Positive | 7260896 - 7261294 | 14405.2 |
| hypothetical protein | APR48_33900 | Not Available | Positive | 7261339 - 7262715 | 49913.4 |
| amidohydrolase | APR48_33905 | Not Available | Positive | 7262810 - 7264399 | 56613.5 |
| phosphoglycerate kinase | APR48_33910 | Not Available | Negative | 7264406 - 7265104 | 25952.7 |
| hypothetical protein | APR48_33915 | Not Available | Negative | 7265149 - 7265757 | 20911.6 |
| alpha/beta hydrolase | APR48_33920 | Not Available | Positive | 7265845 - 7266591 | 26647.7 |
| pyrrolidone-carboxylate peptidase | APR48_33925 | Not Available | Negative | 7266601 - 7267275 | 23730.6 |
| hypothetical protein | APR48_33930 | Not Available | Negative | 7267334 - 7267597 | 9282.21 |
| hypothetical protein | APR48_33935 | Not Available | Negative | 7267616 - 7269097 | 52587.5 |
| lysr family transcriptional regulator | APR48_33940 | Not Available | Positive | 7269540 - 7270484 | 34571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
