Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_33840 | Not Available | Negative | 7248510 - 7249826 | 49553.0 |
| hypothetical protein | APR48_33845 | Not Available | Negative | 7249829 - 7250089 | 9389.21 |
| tartrate dehydrogenase | APR48_33855 | Not Available | Positive | 7251303 - 7252385 | 39265.9 |
| abc transporter permease | APR48_33860 | Not Available | Positive | 7252630 - 7253580 | 34001.8 |
| peptide abc transporter permease | APR48_33865 | Not Available | Positive | 7253577 - 7254458 | 31016.7 |
| abc transporter | APR48_33870 | Not Available | Positive | 7254709 - 7255701 | 35092.1 |
| peptide abc transporter atp-binding protein | APR48_33875 | Not Available | Positive | 7255698 - 7256504 | 29307.5 |
| abc transporter substrate-binding protein | APR48_33880 | Not Available | Positive | 7256626 - 7258122 | 54704.3 |
| abc transporter substrate-binding protein | APR48_33885 | Not Available | Positive | 7258353 - 7259840 | 53387.9 |
| lysr family transcriptional regulator | APR48_33890 | Not Available | Negative | 7259921 - 7260784 | 30654.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
