Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_33735 | Not Available | Negative | 7224608 - 7225798 | 43986.9 |
| tonb-dependent receptor | APR48_33740 | Not Available | Negative | 7225851 - 7227962 | 77671.1 |
| phospholipase | APR48_33745 | Not Available | Positive | 7228176 - 7229777 | 58970.8 |
| hypothetical protein | APR48_33750 | Not Available | Negative | 7229787 - 7230359 | 20171.1 |
| usher protein | APR48_33755 | Not Available | Negative | 7230920 - 7233580 | 95085.4 |
| molecular chaperone groes | APR48_33760 | Not Available | Negative | 7233585 - 7234406 | 29725.9 |
| hypothetical protein | APR48_33765 | Not Available | Negative | 7234594 - 7235007 | 14339.9 |
| hypothetical protein | APR48_33775 | Not Available | Positive | 7235750 - 7236289 | 19614.4 |
| hypothetical protein | APR48_33780 | Not Available | Negative | 7236283 - 7236783 | 17380.7 |
| usher protein | APR48_33785 | Not Available | Negative | 7237366 - 7240107 | 98815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
