Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_02550 | Not Available | Positive | 555246 - 556217 | 34153.4 |
| hypothetical protein | APR48_02555 | Not Available | Positive | 556214 - 557404 | 43964.9 |
| hypothetical protein | APR48_02560 | Not Available | Positive | 557795 - 560929 | 110308.0 |
| d-aminoacylase | APR48_02565 | Not Available | Negative | 560970 - 562412 | 50878.4 |
| mfs transporter | APR48_02570 | Not Available | Negative | 562412 - 563404 | 34611.0 |
| hypothetical protein | APR48_02575 | Not Available | Positive | 563500 - 564435 | 33134.1 |
| hypothetical protein | APR48_02580 | Not Available | Positive | 564610 - 565020 | 15026.9 |
| phosphoglycolate phosphatase | APR48_02585 | Not Available | Positive | 565594 - 566319 | 25021.1 |
| protein tyrosine phosphatase | APR48_02590 | Not Available | Positive | 566448 - 566942 | 18365.1 |
| hypothetical protein | APR48_02595 | Not Available | Negative | 566952 - 568049 | 40087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
