Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | APR48_33675 | Not Available | Negative | 7211134 - 7213458 | 84138.6 |
| pilus assembly protein pilm | APR48_33680 | Not Available | Positive | 7213796 - 7214875 | 39031.8 |
| fimbrial protein | APR48_33685 | Not Available | Positive | 7214872 - 7215498 | 23112.9 |
| pilus assembly protein pilo | APR48_33690 | Not Available | Positive | 7215505 - 7216185 | 25366.4 |
| pilus assembly protein pilp | APR48_33695 | Not Available | Positive | 7216182 - 7216724 | 20141.2 |
| shikimate kinase | APR48_33705 | Not Available | Positive | 7218896 - 7219459 | 20461.5 |
| 3-dehydroquinate synthase | APR48_33710 | Not Available | Positive | 7219554 - 7220675 | 39513.0 |
| deoxyguanosinetriphosphate triphosphohydrolase | APR48_33715 | Not Available | Positive | 7220713 - 7221864 | 43041.9 |
| tonb-dependent receptor | APR48_33725 | Not Available | Negative | 7222252 - 7224298 | 74087.9 |
| hypothetical protein | APR48_33730 | Not Available | Negative | 7224394 - 7224603 | 7543.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
