Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR48_33625 | Not Available | Negative | 7201284 - 7202192 | 33332.0 |
| gtp-binding protein | APR48_33630 | Not Available | Negative | 7202267 - 7203004 | 26858.4 |
| cytochrome c | APR48_33635 | Not Available | Positive | 7203076 - 7203759 | 23744.3 |
| cytochrome c biogenesis protein resb | APR48_33640 | Not Available | Positive | 7203895 - 7206069 | 78663.1 |
| cytochrome c assembly protein | APR48_33645 | Not Available | Positive | 7206066 - 7207382 | 48966.2 |
| sulfoxide reductase catalytic subunit yedy | APR48_33650 | Not Available | Positive | 7207501 - 7208511 | 37488.9 |
| sulfite oxidase | APR48_33655 | Not Available | Positive | 7208558 - 7209208 | 24506.9 |
| diaminopimelate decarboxylase | APR48_33660 | Not Available | Negative | 7209222 - 7210505 | 45821.9 |
| hypothetical protein | APR48_33665 | Not Available | Negative | 7210502 - 7210768 | 8630.42 |
| iron donor protein cyay | APR48_33670 | Not Available | Positive | 7210781 - 7211113 | 12071.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
