Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catecholate siderophore receptor fiu | APR48_33570 | Not Available | Positive | 7189228 - 7191543 | 82987.0 |
| fe(ii)-dependent oxygenase | APR48_33575 | Not Available | Positive | 7191645 - 7192325 | 25400.3 |
| abc transporter permease | APR48_33585 | Not Available | Negative | 7193089 - 7193964 | 30911.6 |
| mannosyltransferase | APR48_33590 | Not Available | Negative | 7193994 - 7194815 | 30155.5 |
| nitrate abc transporter substrate-binding protein | APR48_33595 | Not Available | Negative | 7194818 - 7195828 | 35475.7 |
| two-component system response regulator | APR48_33600 | Not Available | Positive | 7195990 - 7196664 | 24958.5 |
| hypothetical protein | APR48_33605 | Not Available | Positive | 7196661 - 7198100 | 52926.4 |
| s-adenosylmethionine synthetase | APR48_33610 | Not Available | Negative | 7198114 - 7199295 | 42988.9 |
| lipid a biosynthesis acyltransferase | APR48_33615 | Not Available | Positive | 7199517 - 7200413 | 32613.9 |
| lipid a biosynthesis acyltransferase | APR48_33620 | Not Available | Positive | 7200410 - 7201294 | 32815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
