Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | APR48_33470 | Not Available | Negative | 7169194 - 7169646 | 15884.1 |
| 30s ribosomal protein s18 | APR48_33475 | Not Available | Negative | 7169661 - 7169942 | 11040.5 |
| single-stranded dna-binding protein | APR48_33480 | Not Available | Negative | 7169964 - 7170239 | 9855.98 |
| 30s ribosomal protein s6 | APR48_33485 | Not Available | Negative | 7170289 - 7170669 | 14476.3 |
| hypothetical protein | APR48_33490 | Not Available | Negative | 7170827 - 7171285 | 15856.9 |
| phosphoenolpyruvate synthase | APR48_33495 | Not Available | Negative | 7171477 - 7173870 | 86733.7 |
| transcriptional regulator | APR48_33500 | Not Available | Positive | 7174065 - 7174886 | 30995.3 |
| abc transporter | APR48_33505 | Not Available | Negative | 7174906 - 7175715 | 28471.8 |
| abc transporter permease | APR48_33510 | Not Available | Negative | 7175712 - 7176752 | 35225.6 |
| abc transporter substrate-binding protein | APR48_33515 | Not Available | Negative | 7176749 - 7177636 | 31085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
