Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_33420 | Not Available | Positive | 7158977 - 7160008 | 36905.3 |
| glutamate decarboxylase | APR48_33425 | Not Available | Negative | 7160200 - 7161585 | 50133.0 |
| asnc family transcriptional regulator | APR48_33430 | Not Available | Positive | 7161773 - 7162273 | 18030.0 |
| multidrug mfs transporter | APR48_33435 | Not Available | Negative | 7162296 - 7163588 | 47204.0 |
| phosphate starvation-inducible protein phoh | APR48_33440 | Not Available | Positive | 7163786 - 7165340 | 56842.9 |
| glyoxalase | APR48_33445 | Not Available | Positive | 7165491 - 7165862 | 12867.4 |
| hypothetical protein | APR48_33450 | Not Available | Positive | 7165869 - 7166318 | 16647.1 |
| transcriptional regulator | APR48_33455 | Not Available | Positive | 7166341 - 7166808 | 17371.2 |
| dna-binding transcriptional regulator | APR48_33460 | Not Available | Positive | 7166831 - 7167607 | 28887.9 |
| replicative dna helicase | APR48_33465 | Not Available | Negative | 7167618 - 7169015 | 51206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
