Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_33370 | Not Available | Positive | 7148035 - 7148892 | 30674.2 |
| hypothetical protein | APR48_33375 | Not Available | Positive | 7149015 - 7149233 | 7937.1 |
| phenylacetic acid degradation protein | APR48_33380 | Not Available | Negative | 7149238 - 7149639 | 13869.9 |
| hypothetical protein | APR48_33385 | Not Available | Positive | 7149814 - 7150251 | 15740.8 |
| hypothetical protein | APR48_33390 | Not Available | Positive | 7150248 - 7150568 | 11819.2 |
| oxidoreductase | APR48_33395 | Not Available | Negative | 7150589 - 7151245 | 22247.8 |
| alpha/beta hydrolase | APR48_33400 | Not Available | Negative | 7151330 - 7152142 | 27524.2 |
| atpase | APR48_33405 | Not Available | Positive | 7152501 - 7157621 | 183497.0 |
| luxr family transcriptional regulator | APR48_33410 | Not Available | Positive | 7157618 - 7158322 | 25405.8 |
| response regulator receiver protein | APR48_33415 | Not Available | Positive | 7158424 - 7158813 | 14292.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
