Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantothenate synthase | APR48_33270 | Not Available | Positive | 7129133 - 7130356 | 43654.0 |
| hypothetical protein | APR48_33275 | Not Available | Positive | 7130356 - 7130820 | 15869.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | APR48_33280 | Not Available | Positive | 7130817 - 7131263 | 15921.4 |
| hypothetical protein | APR48_33285 | Not Available | Positive | 7131469 - 7131969 | 17356.6 |
| peptidylprolyl isomerase | APR48_33290 | Not Available | Negative | 7132045 - 7132569 | 18964.3 |
| cupin | APR48_33295 | Not Available | Positive | 7132584 - 7133726 | 41747.0 |
| hypothetical protein | APR48_33300 | Not Available | Positive | 7133734 - 7134231 | 18606.0 |
| hypothetical protein | APR48_33305 | Not Available | Positive | 7134671 - 7134904 | 8285.76 |
| hypothetical protein | APR48_33310 | Not Available | Positive | 7135033 - 7135905 | 30277.8 |
| biopolymer transporter exbd | APR48_33315 | Not Available | Positive | 7135994 - 7136428 | 15594.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
