Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_02495 | Not Available | Negative | 539706 - 540713 | 34939.3 |
| hypothetical protein | APR48_02500 | Not Available | Positive | 540837 - 541724 | 32158.3 |
| hypothetical protein | APR48_02505 | Not Available | Positive | 541951 - 545046 | 112626.0 |
| hypothetical protein | APR48_02515 | Not Available | Negative | 546959 - 548605 | 58164.7 |
| hypothetical protein | APR48_02520 | Not Available | Negative | 548754 - 549299 | 20764.5 |
| tonb-dependent receptor | APR48_02525 | Not Available | Negative | 549373 - 551376 | 73106.4 |
| hypothetical protein | APR48_02530 | Not Available | Negative | 551851 - 552822 | 35259.2 |
| rna polymerase subunit sigma | APR48_02535 | Not Available | Negative | 552819 - 553325 | 18975.1 |
| hypothetical protein | APR48_02540 | Not Available | Negative | 553436 - 554335 | 33258.0 |
| hypothetical protein | APR48_02545 | Not Available | Positive | 554429 - 555205 | 28129.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
