Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_33170 | Not Available | Positive | 7111446 - 7112426 | 34298.7 |
| abc transporter substrate-binding protein | APR48_33175 | Not Available | Positive | 7112459 - 7113454 | 33713.6 |
| tetr family transcriptional regulator | APR48_33180 | Not Available | Positive | 7113531 - 7114112 | 20654.7 |
| acetyl-coa acetyltransferase | APR48_33185 | Not Available | Positive | 7114203 - 7115336 | 38657.5 |
| dehydratase | APR48_33190 | Not Available | Positive | 7115419 - 7115886 | 17188.5 |
| hypothetical protein | APR48_33195 | Not Available | Negative | 7115896 - 7116708 | 30028.9 |
| hypothetical protein | APR48_33200 | Not Available | Positive | 7116760 - 7117284 | 18213.9 |
| hsp33 chaperonin | APR48_33205 | Not Available | Positive | 7117322 - 7118320 | 36375.8 |
| 3-hydroxyisobutyrate dehydrogenase | APR48_33210 | Not Available | Negative | 7118336 - 7119205 | 30687.0 |
| short-chain dehydrogenase | APR48_33215 | Not Available | Negative | 7119208 - 7119999 | 27187.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
