Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | APR48_33010 | Not Available | Negative | 7076520 - 7077008 | 17437.1 |
| hypothetical protein | APR48_33015 | Not Available | Negative | 7077084 - 7077818 | 25940.1 |
| iron transporter | APR48_33020 | Not Available | Negative | 7078095 - 7079402 | 45810.6 |
| hypothetical protein | APR48_33025 | Not Available | Negative | 7079519 - 7080475 | 36221.5 |
| hypothetical protein | APR48_33040 | Not Available | Negative | 7084479 - 7084679 | 7161.43 |
| enoyl-coa hydratase | APR48_33045 | Not Available | Negative | 7084992 - 7085774 | 27476.7 |
| coa-transferase | APR48_33050 | Not Available | Negative | 7085785 - 7087011 | 43603.2 |
| hypothetical protein | APR48_33055 | Not Available | Negative | 7087029 - 7087955 | 32927.8 |
| acyl-coa dehydrogenase | APR48_33060 | Not Available | Negative | 7087952 - 7089109 | 41567.7 |
| short-chain dehydrogenase | APR48_33065 | Not Available | Negative | 7089106 - 7089900 | 27699.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
