Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | APR48_32960 | Not Available | Negative | 7063961 - 7064884 | 31373.8 |
| gntr family transcriptional regulator | APR48_32965 | Not Available | Negative | 7064980 - 7065789 | 29302.9 |
| mfs transporter | APR48_32970 | Not Available | Negative | 7065830 - 7067002 | 40182.4 |
| transcriptional regulator | APR48_32975 | Not Available | Negative | 7067006 - 7068010 | 35889.0 |
| alpha-ketoglutarate dehydrogenase | APR48_32980 | Not Available | Negative | 7068101 - 7070755 | 95932.8 |
| arsr family transcriptional regulator | APR48_32985 | Not Available | Positive | 7070861 - 7071334 | 17370.2 |
| alkaline phosphatase | APR48_32990 | Not Available | Negative | 7071353 - 7073356 | 70667.5 |
| phosphatase | APR48_32995 | Not Available | Negative | 7073579 - 7075556 | 70633.0 |
| hypothetical protein | APR48_33000 | Not Available | Negative | 7075647 - 7076006 | 12822.7 |
| hypothetical protein | APR48_33005 | Not Available | Negative | 7076104 - 7076487 | 13205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
