Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_32860 | Not Available | Positive | 7044580 - 7044963 | 13786.5 |
| peroxiredoxin | APR48_32865 | Not Available | Positive | 7045164 - 7045640 | 17632.5 |
| abc transporter substrate-binding protein | APR48_32870 | Not Available | Positive | 7045977 - 7046747 | 27406.9 |
| amino acid abc transporter permease | APR48_32875 | Not Available | Positive | 7046839 - 7047609 | 28884.8 |
| arabinose abc transporter permease | APR48_32880 | Not Available | Positive | 7047655 - 7049280 | 58454.4 |
| mfs transporter | APR48_32885 | Not Available | Positive | 7049303 - 7050466 | 39889.4 |
| creatininase | APR48_32890 | Not Available | Positive | 7050584 - 7051405 | 30127.0 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | APR48_32895 | Not Available | Positive | 7051444 - 7052250 | 29521.7 |
| abc transporter atp-binding protein | APR48_32900 | Not Available | Positive | 7052267 - 7053118 | 31061.7 |
| fad-binding protein | APR48_32905 | Not Available | Positive | 7053090 - 7054490 | 50807.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
