Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR48_32760 | Not Available | Negative | 7022718 - 7023512 | 27413.2 |
| tetr family transcriptional regulator | APR48_32765 | Not Available | Negative | 7023540 - 7024250 | 26202.8 |
| abc transporter atp-binding protein | APR48_32770 | Not Available | Positive | 7024460 - 7025353 | 32233.1 |
| abc transporter permease | APR48_32775 | Not Available | Positive | 7025353 - 7026231 | 30471.7 |
| abc transporter permease | APR48_32780 | Not Available | Positive | 7026542 - 7027579 | 37538.4 |
| amino acid abc transporter substrate-binding protein | APR48_32785 | Not Available | Positive | 7027594 - 7028784 | 42778.8 |
| abc transporter atp-binding protein | APR48_32790 | Not Available | Positive | 7028798 - 7029616 | 29478.6 |
| long-chain fatty acid--coa ligase | APR48_32795 | Not Available | Positive | 7029613 - 7031427 | 66530.4 |
| hypothetical protein | APR48_32800 | Not Available | Negative | 7031506 - 7031838 | 12038.8 |
| atp-dependent chaperone clpb | APR48_32805 | Not Available | Negative | 7031845 - 7034484 | 96357.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
