Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_32705 | Not Available | Negative | 7008316 - 7008771 | 15460.2 |
| hypothetical protein | APR48_32710 | Not Available | Negative | 7008844 - 7009314 | 15410.5 |
| hypothetical protein | APR48_32715 | Not Available | Negative | 7009366 - 7010046 | 22698.8 |
| hypothetical protein | APR48_32720 | Not Available | Negative | 7010500 - 7016355 | 216806.0 |
| hypothetical protein | APR48_32730 | Not Available | Positive | 7016926 - 7017381 | 15244.5 |
| sulfate transporter | APR48_32735 | Not Available | Positive | 7017526 - 7019271 | 60875.4 |
| lysr family transcriptional regulator | APR48_32740 | Not Available | Positive | 7019282 - 7020169 | 32701.3 |
| hypothetical protein | APR48_32745 | Not Available | Negative | 7020185 - 7020772 | 20819.0 |
| peptide chain release factor i | APR48_32750 | Not Available | Negative | 7020841 - 7021263 | 15614.7 |
| acetyl-coa acetyltransferase | APR48_32755 | Not Available | Negative | 7021490 - 7022674 | 40761.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
