Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit beta | APR48_32600 | Not Available | Negative | 6986081 - 6986699 | 20982.8 |
| aspartate-semialdehyde dehydrogenase | APR48_32610 | Not Available | Negative | 6987415 - 6988557 | 40571.3 |
| 3-isopropylmalate dehydrogenase | APR48_32615 | Not Available | Negative | 6988651 - 6989751 | 39402.4 |
| 3-isopropylmalate dehydratase | APR48_32620 | Not Available | Negative | 6989788 - 6990444 | 24593.4 |
| isopropylmalate isomerase | APR48_32625 | Not Available | Negative | 6990460 - 6991881 | 50729.7 |
| lysr family transcriptional regulator | APR48_32630 | Not Available | Negative | 6991925 - 6992884 | 34300.3 |
| type ii citrate synthase | APR48_32635 | Not Available | Negative | 6993060 - 6994370 | 48653.8 |
| hypothetical protein | APR48_32640 | Not Available | Negative | 6994383 - 6994751 | 13305.9 |
| succinate dehydrogenase | APR48_32645 | Not Available | Negative | 6994767 - 6995468 | 26654.4 |
| fumarate reductase | APR48_32650 | Not Available | Negative | 6995516 - 6997324 | 65968.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
