Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR48_32445 | Not Available | Positive | 6955072 - 6956461 | 46396.4 |
| hypothetical protein | APR48_32450 | Not Available | Positive | 6956462 - 6957867 | 50560.2 |
| hypothetical protein | APR48_32455 | Not Available | Positive | 6957908 - 6958567 | 23023.7 |
| mfs transporter | APR48_32460 | Not Available | Negative | 6958575 - 6959771 | 42914.2 |
| chorismate synthase | APR48_32465 | Not Available | Negative | 6959771 - 6960883 | 39434.7 |
| hypothetical protein | APR48_32470 | Not Available | Negative | 6960959 - 6961144 | 6823.26 |
| mfs transporter | APR48_32475 | Not Available | Negative | 6961199 - 6962746 | 52537.9 |
| hypothetical protein | APR48_32480 | Not Available | Negative | 6962743 - 6963099 | 12916.3 |
| dehydrogenase | APR48_32485 | Not Available | Negative | 6963096 - 6963467 | 13494.1 |
| rna polymerase subunit sigma-24 | APR48_32490 | Not Available | Negative | 6963559 - 6964815 | 45918.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
