Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_32395 | Not Available | Negative | 6946031 - 6946939 | 32546.2 |
| glutamate synthase | APR48_32400 | Not Available | Negative | 6946936 - 6948654 | 61498.9 |
| zinc chelation protein secc | APR48_32405 | Not Available | Positive | 6948712 - 6949509 | 29941.1 |
| mfs transporter | APR48_32410 | Not Available | Positive | 6949568 - 6950761 | 41473.9 |
| acetyltransferase | APR48_32415 | Not Available | Negative | 6950751 - 6951071 | 11869.2 |
| ketosteroid isomerase | APR48_32420 | Not Available | Negative | 6951095 - 6951592 | 18473.8 |
| lysr family transcriptional regulator | APR48_32425 | Not Available | Negative | 6951634 - 6952530 | 33048.0 |
| twin-arginine translocation pathway signal protein | APR48_32430 | Not Available | Positive | 6952609 - 6953793 | 43049.0 |
| damage-inducible protein cina | APR48_32435 | Not Available | Negative | 6953794 - 6954324 | 18105.5 |
| phosphatidylglycerophosphatase | APR48_32440 | Not Available | Negative | 6954336 - 6954863 | 19223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
